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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8762191_8781654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8762191 - 8781654

Intron Length:

19464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

CGCCTCTAAAAT

Flanking Amino Acid:

PGSAARRLYSRMEASCLELA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

0.57

73.6

28.6

Major PPT

85.6

0.8

80.2

31.8

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

46.8

-0.1

1.8

58.62

44.3

Associated Gene:

Gene:

GPSM1

Ensembl Gene ID:

ENSAPLG00000007805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008137

8720421 - 8781713

61293