Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8805483_8805897_F

Intron Information:

Intron Rank:

146440

Intron Class:

major

Intron Phase:

Intron Coordinates:

8805483 - 8805897

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACAGTTG

5'SS Class:

major

3'SS Sequence:

ATCATTTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TGTTTCAAAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

1.2

54.8

44.8

Major BPS

71.6

0.54

33.1

Major PPT

74.8

0.56

0.9

68.7

36.5

Minor 5ss

38.2

-1.3

3.6

49.3

Minor BPS

51.1

0.01

1.9

67.43

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028907

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035935

8801287 - 8817296

16010