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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8857008_8860767_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8857008 - 8860767

Intron Length:

3760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGTGTCAA

5'SS Class:

major

3'SS Sequence:

AATCCCCAAATAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

AATCCCCAAATA

Flanking Amino Acid:

HSFSVLPLKEILQIMRRYIH

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

65.7

35.3

Major BPS

0.65

1.1

77.4

37.3

Major PPT

54.8

0.11

33.4

Minor 5ss

35.9

-1.6

2.8

40.4

Minor BPS

-0.1

1.9

61.49

38.3

Associated Gene:

Gene:

QSOX2

Ensembl Gene ID:

ENSAPLG00000008146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037319

8843075 - 8868554

25480

ENSAPLT00000033563

8843075 - 8869145

26071