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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8863684_8868902_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8863684 - 8868902

Intron Length:

5219

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAAAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCGGGACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAATTAT

U12 Branch Point Sequence:

ACAACCACAATT

Flanking Amino Acid:

SETELGDMREQRARTHPPGC

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

1.1

71.9

39.2

Major BPS

64.6

0.36

1.1

55.7

39.9

Major PPT

-0.2

1.1

37.3

38.8

Minor 5ss

19.8

-3.5

31.7

42.9

Minor BPS

46.8

-0.1

1.8

61.67

41.9

Associated Gene:

Gene:

QSOX2

Ensembl Gene ID:

ENSAPLG00000008146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033563

8843075 - 8869145

26071