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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9032448_9033067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9032448 - 9033067

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCAAA

U12 Branch Point Sequence:

CCTCCTTGCAAA

Flanking Amino Acid:

KMADVSAEEKVLVFVSVSLP

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.7

33.3

Major BPS

52.6

0.06

1.4

62.7

41.6

Major PPT

81.3

0.7

0.8

77.5

31.2

Minor 5ss

40.1

-1.1

2.9

49.5

41.1

Minor BPS

42.7

-0.5

1.9

50.41

Associated Gene:

Gene:

UBAC1

Ensembl Gene ID:

ENSAPLG00000010320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008642

9024841 - 9041796

16956