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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9033842_9034384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9033842 - 9034384

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

GTTTTCACAGCT

Flanking Amino Acid:

RTVAHHNMRDFQTELRKILV

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

87.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

92.5

0.96

0.6

88.3

21.4

Minor 5ss

42.7

-0.8

2.8

59.4

38.1

Minor BPS

48.4

-0

74.08

42.3

Associated Gene:

Gene:

UBAC1

Ensembl Gene ID:

ENSAPLG00000010320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010771

9024841 - 9041796

16956

ENSAPLT00000008642

9024841 - 9041796

16956