Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_9034488_9035175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9034488 - 9035175

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGAACA

5'SS Class:

major

3'SS Sequence:

TGTGTATATCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TCAGTCTGAACG

Flanking Amino Acid:

DAVELFKKANAMLDEDEEDR

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

68.8

35.5

Major BPS

64.1

0.35

1.2

45.5

Major PPT

68.1

0.41

59.8

45.4

Minor 5ss

-1.1

2.8

46.9

42.6

Minor BPS

52.9

-0

1.7

56.41

44.9

Associated Gene:

Gene:

UBAC1

Ensembl Gene ID:

ENSAPLG00000010320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010771

9024841 - 9041796

16956

ENSAPLT00000008642

9024841 - 9041796

16956