Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_9038112_9038997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9038112 - 9038997

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TGATTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGAAAT

U12 Branch Point Sequence:

CAACCATGAAAT

Flanking Amino Acid:

RVNNNQQNAACEWLLGDRKP

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.3

38.8

Major BPS

58.4

0.21

1.2

38.7

Major PPT

83.9

0.76

0.8

81.4

Minor 5ss

32.4

-2

2.6

39.4

38.9

Minor BPS

45.9

-0.2

1.8

59.84

42.1

Associated Gene:

Gene:

UBAC1

Ensembl Gene ID:

ENSAPLG00000010320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008642

9024841 - 9041796

16956

ENSAPLT00000010771

9024841 - 9041796

16956