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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9072549_9073527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9072549 - 9073527

Intron Length:

979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCTGAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TATTCCTACATT

Flanking Amino Acid:

QLMESPGHQKSPSKWYWKLV

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

66.5

0.37

62.4

38.5

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

58.6

0.35

2.1

80.78

41.5

Associated Gene:

Gene:

CAMSAP1

Ensembl Gene ID:

ENSAPLG00000009966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033717

9051995 - 9086791

34797