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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9077107_9077633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9077107 - 9077633

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCACCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCTTTCTCACCT

Flanking Amino Acid:

YYCPEQMKLDDICLKEVTSI

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

0.87

0.8

85.6

Major PPT

73.8

0.54

0.8

65.3

36.1

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

59.7

0.38

1.9

79.4

Associated Gene:

Gene:

CAMSAP1

Ensembl Gene ID:

ENSAPLG00000009966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033717

9051995 - 9086791

34797

ENSAPLT00000010392

9071577 - 9086791

15215