Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_9077774_9077876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9077774 - 9077876

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

ATTATTGTGACA

Flanking Amino Acid:

DMLYAPLVLKPNVMVFIAEL

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

0.42

1.3

60.1

46.3

Major PPT

90.2

0.9

0.6

84.6

30.4

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

48.1

-0.1

64.24

36.1

Associated Gene:

Gene:

CAMSAP1

Ensembl Gene ID:

ENSAPLG00000009966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010392

9071577 - 9086791

15215

ENSAPLT00000033717

9051995 - 9086791

34797