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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9077974_9078400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9077974 - 9078400

Intron Length:

427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

AATATATGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

ATGTTATAAATA

Flanking Amino Acid:

QPRDIQEIKDVKTVLQQKSS

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

78.6

0.71

78.6

Major PPT

61.8

0.27

1.1

54.5

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

-0

1.9

62.04

38.7

Associated Gene:

Gene:

CAMSAP1

Ensembl Gene ID:

ENSAPLG00000009966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033717

9051995 - 9086791

34797

ENSAPLT00000010392

9071577 - 9086791

15215