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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9079404_9079861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9079404 - 9079861

Intron Length:

458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

AAAAATATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AAAACATTAACT

Flanking Amino Acid:

QKSLQGEDSPGHRHRSNSLT

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

79.8

35.3

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

62.4

0.28

1.1

56.3

47.2

Minor 5ss

37.9

-1.4

47.1

42.6

Minor BPS

62.6

0.47

1.6

75.43

Associated Gene:

Gene:

CAMSAP1

Ensembl Gene ID:

ENSAPLG00000009966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033717

9051995 - 9086791

34797

ENSAPLT00000010392

9071577 - 9086791

15215