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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9079947_9080310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9079947 - 9080310

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGGT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTGTATATAAGC

Flanking Amino Acid:

SVLAWPEKKPRPLSQPTPFA

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

69.7

40.9

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

90.8

0.92

0.6

85.1

29.7

Minor 5ss

-2.2

3.6

47.4

Minor BPS

47.8

-0.1

63.91

41.7

Associated Gene:

Gene:

CAMSAP1

Ensembl Gene ID:

ENSAPLG00000009966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033717

9051995 - 9086791

34797

ENSAPLT00000010392

9071577 - 9086791

15215