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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9082748_9084110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9082748 - 9084110

Intron Length:

1363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

ATGAATCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TATTCTTTAAAG

Flanking Amino Acid:

QKSGVGFFFKDEQKAEDELA

Intron Amino Acid Position:

1239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.2

33.9

Major BPS

0.7

0.9

79.6

29.1

Major PPT

70.7

0.47

62.7

43.2

Minor 5ss

38.7

-1.3

2.9

50.6

45.9

Minor BPS

73.3

0.59

1.4

73.99

Associated Gene:

Gene:

CAMSAP1

Ensembl Gene ID:

ENSAPLG00000009966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033717

9051995 - 9086791

34797

ENSAPLT00000010392

9071577 - 9086791

15215