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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9085550_9085813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9085550 - 9085813

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTAATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATG

Flanking Amino Acid:

NEPHKNSILEELEKCDANHY

Intron Amino Acid Position:

1467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

0.9

75.4

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

72.1

0.56

1.2

71.31

36.2

Associated Gene:

Gene:

CAMSAP1

Ensembl Gene ID:

ENSAPLG00000009966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033717

9051995 - 9086791

34797

ENSAPLT00000010392

9071577 - 9086791

15215