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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9109260_9109838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9109260 - 9109838

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACC

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAATT

Flanking Amino Acid:

TMLLIYLSYKGNIWEQIFRI

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.9

0.67

0.8

77.6

36.3

Minor 5ss

35.2

-1.7

2.8

43.7

Minor BPS

70.8

0.73

1.7

90.5

32.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032480

9095213 - 9125274

30062

ENSAPLT00000018402

9097680 - 9111458

13779

ENSAPLT00000038375

9094213 - 9114518

20306

ENSAPLT00000009855

9095213 - 9125274

30062

ENSAPLT00000037949

9094213 - 9114518

20306

ENSAPLT00000035258

9095213 - 9114518

19306