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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9171489_9173089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9171489 - 9173089

Intron Length:

1601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGAACT

5'SS Class:

major

3'SS Sequence:

TATCTGAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTTTAATAAACT

Flanking Amino Acid:

VEPDKASKDAK*

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

73.6

Major BPS

81.8

0.79

1.1

34.5

Major PPT

69.8

0.45

63.3

41.7

Minor 5ss

43.9

-0.7

2.8

59.4

38.9

Minor BPS

53.6

0.19

2.1

79.32

42.1

Associated Gene:

Gene:

PSMD5

Ensembl Gene ID:

ENSAPLG00000009203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009607

9171485 - 9179500

8016