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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9173200_9173667_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9173200 - 9173667

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TCTTTGCATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGTCTTTGCATA

Flanking Amino Acid:

LHCGALRVFTAIANQPWAQK

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

75.6

35.1

Major BPS

0.62

1.4

85.7

34.9

Major PPT

74.7

0.56

0.9

69.6

35.9

Minor 5ss

47.7

-0.2

2.8

71.6

38.3

Minor BPS

45.2

-0.3

1.8

57.65

Associated Gene:

Gene:

PSMD5

Ensembl Gene ID:

ENSAPLG00000009203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026073

9172942 - 9179500

6559

ENSAPLT00000009607

9171485 - 9179500

8016