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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9173809_9174430_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9173809 - 9174430

Intron Length:

622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

CTGATGTATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTCTGTACAT

Flanking Amino Acid:

DAISSLLYLPPEQQTEDLLR

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

73.8

37.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

64.1

0.32

58.4

42.1

Minor 5ss

0.61

2.2

85.2

31.6

Minor BPS

50.7

0.1

2.3

80.63

41.5

Associated Gene:

Gene:

PSMD5

Ensembl Gene ID:

ENSAPLG00000009203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009607

9171485 - 9179500

8016

ENSAPLT00000026073

9172942 - 9179500

6559