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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9176276_9176656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9176276 - 9176656

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

GTCAAACGAATT

Flanking Amino Acid:

GELTGDDVLVRATCIEMVTS

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

82.9

0.74

0.9

80.8

36.8

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

38.4

-0.8

1.9

53.9

40.7

Associated Gene:

Gene:

PSMD5

Ensembl Gene ID:

ENSAPLG00000009203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026073

9172942 - 9179500

6559

ENSAPLT00000009607

9171485 - 9179500

8016