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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9180324_9182619_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9180324 - 9182619

Intron Length:

2296

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCAGGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTGCATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTACTTTACAC

Flanking Amino Acid:

PPGSGLGPGRVMTLSLLMYP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.3

62.6

38.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

0.7

0.8

78.8

34.4

Minor 5ss

21.6

-3.3

26.5

38.2

Minor BPS

58.7

0.25

1.8

72.22

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009377

9180267 - 9187987

7721