Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_9192124_9192240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9192124 - 9192240

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCGAC

U12 Branch Point Sequence:

TGGGGCCGACGC

Flanking Amino Acid:

FTLDEIQSLKSASSGQTFLS

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

40.5

-0.6

1.3

29.5

35.8

Major PPT

73.4

0.53

0.8

64.8

30.7

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

30.3

-1.5

2.1

35.98

40.8

Associated Gene:

Gene:

PHF19

Ensembl Gene ID:

ENSAPLG00000008706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009074

9191542 - 9196933

5392