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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9192327_9192500_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9192327 - 9192500

Intron Length:
174

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGC|GTGAGTCCT

5'SS Class:
major

3'SS Sequence:
TTTCACGGTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAC

U12 Branch Point Sequence:
CTTGTTTTCACG

Flanking Amino Acid:
KFLLEDAIPSSDFTSAWSTN

Intron Amino Acid Position:
412

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.6
0.34
1.3
62.3
43.9

Major BPS
90.1
0.99
0.7
91.6
20.3

Major PPT
71.5
0.48
1
65.5
40.7

Minor 5ss
32.4
-2
2.9
38.2
39.5

Minor BPS
48.9
-0.2
1.9
57.56
45

Associated Gene:

Gene:
PHF19

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9191542 - 9196933
5392