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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9207721_9208259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9207721 - 9208259

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AGAGTATTAATC

Flanking Amino Acid:

RFSEVGCSFRGSKEKMKEHE

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

83.2

30.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.81

0.8

80.1

Minor 5ss

34.6

-1.8

2.7

41.5

Minor BPS

48.7

-0.1

1.6

55.17

36.8

Associated Gene:

Gene:

TRAF1

Ensembl Gene ID:

ENSAPLG00000022423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048461

9202577 - 9233172

30596

ENSAPLT00000018865

9202577 - 9232044

29468