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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9209160_9212321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9209160 - 9212321

Intron Length:

3162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAATGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTGTTTTAATG

Flanking Amino Acid:

KRSLSSSEYQKHSCEGSLCR

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.3

0.48

1.1

66.5

43.2

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

60.4

0.19

1.5

61.64

41.7

Associated Gene:

Gene:

TRAF1

Ensembl Gene ID:

ENSAPLG00000022423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018865

9202577 - 9232044

29468

ENSAPLT00000048461

9202577 - 9233172

30596