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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9218740_9231971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9218740 - 9231971

Intron Length:

13232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

TCATCTTTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTCCTCATCT

Flanking Amino Acid:

MHFLILALSLLQMAEKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

73.9

36.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

75.2

0.57

71.9

37.9

Minor 5ss

35.8

-1.6

2.9

53.8

42.8

Minor BPS

72.1

0.77

1.8

92.57

36.2

Associated Gene:

Gene:

TRAF1

Ensembl Gene ID:

ENSAPLG00000022423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048461

9202577 - 9233172

30596

ENSAPLT00000018865

9202577 - 9232044

29468