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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9236630_9236900_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9236630 - 9236900

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTAAAT

U12 Branch Point Sequence:

TTAGGAGTAAAT

Flanking Amino Acid:

ALKISIGYSFRFQYPLDSST

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

58.4

0.21

1.2

38.7

Major PPT

0.68

0.8

77.7

36.7

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

39.8

-0.7

2.5

63.06

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007863

9236277 - 9249308

13032