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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9246605_9246894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9246605 - 9246894

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

TKIDRSVSVKGHLMGEVIAT

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.9

0.79

0.8

80.3

31.7

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007863

9236277 - 9249308

13032