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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9248477_9249125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9248477 - 9249125

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTACTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TGAACATTAAAA

Flanking Amino Acid:

VYNHRASSIKFCVKIAVGDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

80.7

34.7

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

0.83

0.7

84.6

29.8

Minor 5ss

-0.9

2.9

59.3

45.1

Minor BPS

54.3

0.13

1.8

65.22

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007863

9236277 - 9249308

13032