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Intron Name: Anas_platyrhynchos_platyrhynchos_18_92575_92892_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92575 - 92892

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

CCCCTCCTACCA

Flanking Amino Acid:

ACGWVHFMAKVSVDIFKGFP

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

71.5

40.2

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

69.5

0.44

0.9

61.8

33.5

Minor 5ss

30.1

-2.3

3.1

38.3

46.6

Minor BPS

43.2

-0.5

1.9

48.2

42.6

Associated Gene:

Gene:

ABCA2

Ensembl Gene ID:

ENSAPLG00000002548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025674

72667 - 112105

39439

ENSAPLT00000017929

72667 - 112105

39439

ENSAPLT00000002789

72667 - 112105

39439

ENSAPLT00000036122

70053 - 112105

42053