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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9299978_9300479_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9299978 - 9300479

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTCT

5'SS Class:

strong_major

3'SS Sequence:

GATTAATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATGTGATTAATT

Flanking Amino Acid:

LRWLLDNSGTGNKDEIDNLQ

Intron Amino Acid Position:

967

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

74.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.3

0.55

65.9

43.9

Minor 5ss

46.6

-0.4

2.8

66.3

44.7

Minor BPS

55.6

0.25

75.36

41.7

Associated Gene:

Gene:

CNTRL

Ensembl Gene ID:

ENSAPLG00000004711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034957

9285850 - 9314772

28923

ENSAPLT00000004948

9285850 - 9313993

28144