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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9306356_9307235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9306356 - 9307235

Intron Length:

880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTGTTCACAATA

Flanking Amino Acid:

LEKTQVAVLEEKLKLENIQR

Intron Amino Acid Position:

1591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

89.7

22.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

88.2

0.86

0.6

88.7

20.6

Minor 5ss

37.9

-1.4

51.7

39.1

Minor BPS

52.6

0.08

1.8

68.06

38.7

Associated Gene:

Gene:

CNTRL

Ensembl Gene ID:

ENSAPLG00000004711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034957

9285850 - 9314772

28923

ENSAPLT00000004948

9285850 - 9313993

28144