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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9308376_9309084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9308376 - 9309084

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTATATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTCTGTTTATAT

Flanking Amino Acid:

SRQRLHLLEQDLKNNKRHQE

Intron Amino Acid Position:

1741

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

25.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

80.6

0.69

0.9

73.6

40.4

Minor 5ss

42.5

-0.8

2.8

45.4

Minor BPS

49.2

0.02

2.1

72.46

44.8

Associated Gene:

Gene:

CNTRL

Ensembl Gene ID:

ENSAPLG00000004711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034957

9285850 - 9314772

28923

ENSAPLT00000004948

9285850 - 9313993

28144