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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9310787_9311086_F


Intron Information:

Intron Rank:
35

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9310787 - 9311086

Intron Length:
300

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAC|GTAAGCTGT

5'SS Class:
major

3'SS Sequence:
TGCATTTTCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTAAA

U12 Branch Point Sequence:
TCTTTCTGCATT

Flanking Amino Acid:
QRTQLERELHEQKHENKCLQ

Intron Amino Acid Position:
1948

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.9
0.54
1.3
69.7
43.7

Major BPS
75.2
0.63
1.1
75.9
36.3

Major PPT
72.4
0.51
0.9
65.1
41.1

Minor 5ss
47
-0.3
2.9
63.8
41.3

Minor BPS
54.3
0.22
1.9
75.82
41.6

Associated Gene:

Gene:
CNTRL

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9285850 - 9314772
28923

9285850 - 9313993
28144