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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9311228_9312367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9311228 - 9312367

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAACTG

5'SS Class:

major

3'SS Sequence:

TTTTATGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ACTGTTTTATGT

Flanking Amino Acid:

QQDYTDLQNQVKTREDLEER

Intron Amino Acid Position:

1995

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

61.4

43.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.9

0.72

0.9

77.5

36.5

Minor 5ss

-1

3.2

48.1

Minor BPS

45.8

-0.2

1.9

60.55

44.1

Associated Gene:

Gene:

CNTRL

Ensembl Gene ID:

ENSAPLG00000004711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034957

9285850 - 9314772

28923

ENSAPLT00000004948

9285850 - 9313993

28144