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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9317840_9318456_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9317840 - 9318456

Intron Length:
617

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTAAGTTAC

5'SS Class:
major

3'SS Sequence:
GCTCTCTTCGTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATAAC

U12 Branch Point Sequence:
GTAACCTAAATA

Flanking Amino Acid:
GLLFLEASAKTGENVEDAFL

Intron Amino Acid Position:
176

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1.3
78.4
32.4

Major BPS
61.3
0.28
1
62
30.6

Major PPT
73.8
0.54
0.8
68.9
31.5

Minor 5ss
41.9
-0.9
2.8
51.8
38.6

Minor BPS
57.6
0.23
1.7
65.91
40.4

Associated Gene:

Gene:
RAB14

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9317445 - 9330771
13327

9317445 - 9330771
13327