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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9353938_9354483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9353938 - 9354483

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATTT

Flanking Amino Acid:

GYFKSGIKYKAGGVASGFRH

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.1

0.63

0.9

77.4

36.6

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

63.5

0.5

1.6

78.46

Associated Gene:

Gene:

GSN

Ensembl Gene ID:

ENSAPLG00000005342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005623

9350557 - 9364693

14137