Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_9354646_9354885_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9354646 - 9354885

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TCTTCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATGAT

U12 Branch Point Sequence:

AGCTGCATGATT

Flanking Amino Acid:

GDCFILDLGSNIYQWCGSNS

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

71.8

38.2

Major BPS

54.3

0.11

1.4

47.7

45.7

Major PPT

78.3

0.64

0.7

69.9

Minor 5ss

-1.2

2.7

48.2

40.4

Minor BPS

46.2

-0.2

62.78

41.6

Associated Gene:

Gene:

GSN

Ensembl Gene ID:

ENSAPLG00000005342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005623

9350557 - 9364693

14137