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Intron Name: Anas_platyrhynchos_platyrhynchos_18_94539_95255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94539 - 95255

Intron Length:

717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGAACA

5'SS Class:

major

3'SS Sequence:

CTTGTCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

CTTGTCTTCACA

Flanking Amino Acid:

QLDVPKIISRLQLDEVNSTA

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

70.4

35.4

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

81.3

0.71

0.8

75.7

32.9

Minor 5ss

27.9

-2.5

2.7

24.7

36.3

Minor BPS

57.6

0.23

1.9

70.02

42.9

Associated Gene:

Gene:

ABCA2

Ensembl Gene ID:

ENSAPLG00000002548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025674

72667 - 112105

39439

ENSAPLT00000017929

72667 - 112105

39439

ENSAPLT00000002789

72667 - 112105

39439

ENSAPLT00000036122

70053 - 112105

42053