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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9462490_9464950_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9462490 - 9464950

Intron Length:

2461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAATCCA

5'SS Class:

weak_major

3'SS Sequence:

GCTCATTTGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

GCTGGCTCATTT

Flanking Amino Acid:

LSASGDGRHLKGRSCIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.6

0.11

1.3

52.2

40.6

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

56.9

0.16

1.2

55.7

43.5

Minor 5ss

30.3

-2.3

2.9

37.6

Minor BPS

41.5

-0.5

2.1

56.22

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034404

9462468 - 9469327

6860