Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_9630163_9630799_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9630163 - 9630799

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

TTGTTTTGCACA

Flanking Amino Acid:

AGKPGPTCFQILGFDILLMK

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

71.1

37.5

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

79.2

0.66

0.9

75.8

38.1

Minor 5ss

32.7

-2

3.1

40.4

45.8

Minor BPS

49.8

-0

1.9

67.12

39.9

Associated Gene:

Gene:

TTLL11

Ensembl Gene ID:

ENSAPLG00000015039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015664

9630031 - 9639465

9435