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Intron Name: Anas_platyrhynchos_platyrhynchos_18_96348_96558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

96348 - 96558

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAGCAT

U12 Branch Point Sequence:

GCATGCTCAGCA

Flanking Amino Acid:

LLGSSIDLREVYHLLFGSSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

32.9

Major BPS

50.9

0.02

1.5

63.4

42.8

Major PPT

66.7

0.38

60.6

40.2

Minor 5ss

27.5

-2.6

3.4

39.1

46.7

Minor BPS

44.3

-0.4

2.1

53.36

44.6

Associated Gene:

Gene:

ABCA2

Ensembl Gene ID:

ENSAPLG00000002548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025674

72667 - 112105

39439

ENSAPLT00000017929

72667 - 112105

39439

ENSAPLT00000002789

72667 - 112105

39439

ENSAPLT00000036122

70053 - 112105

42053