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Intron Name: Anas_platyrhynchos_platyrhynchos_18_97027_100147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

97027 - 100147

Intron Length:

3121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAT

U12 Branch Point Sequence:

CATCCCTGAAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

59.5

0.24

1.5

72.5

43.5

Major PPT

73.4

0.53

0.9

65.6

36.2

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

52.1

0.05

1.8

62.14

42.7

Associated Gene:

Gene:

ABCA2

Ensembl Gene ID:

ENSAPLG00000002548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002789

72667 - 112105

39439