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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9820910_9821384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9820910 - 9821384

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAACA

5'SS Class:

major

3'SS Sequence:

ATTTATTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GTTTTGTTAATT

Flanking Amino Acid:

LFLRDWKGIKNIMTALDDKL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.3

74.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

83.6

0.76

0.8

34.8

Minor 5ss

29.2

-2.4

2.6

33.3

41.3

Minor BPS

65.1

0.55

83.97

37.3

Associated Gene:

Gene:

PDCL

Ensembl Gene ID:

ENSAPLG00000014180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032126

9815922 - 9821732

5811

ENSAPLT00000014775

9818283 - 9822258

3976