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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9827495_9828106_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9827495 - 9828106

Intron Length:

612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATATTTGTAACT

Flanking Amino Acid:

RQSLGEDLVILEEQKTILPV

Intron Amino Acid Position:

1126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

74.7

35.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

89.7

0.89

0.6

89.1

19.9

Minor 5ss

36.1

-1.6

3.5

45.5

Minor BPS

58.8

0.35

78.4

38.1

Associated Gene:

Gene:

RC3H2

Ensembl Gene ID:

ENSAPLG00000013920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022596

9826296 - 9844074

17779

ENSAPLT00000014540

9826296 - 9844074

17779