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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9828256_9829341_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9828256 - 9829341

Intron Length:

1086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TGTTGATGGACA

Flanking Amino Acid:

EPDGQGEQIEEILDIQLGIS

Intron Amino Acid Position:

1077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.81

0.6

82.1

22.6

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

46.9

-0.2

2.2

65.44

40.5

Associated Gene:

Gene:

RC3H2

Ensembl Gene ID:

ENSAPLG00000013920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022596

9826296 - 9844074

17779

ENSAPLT00000014540

9826296 - 9844074

17779