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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9830129_9830507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9830129 - 9830507

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TTGTAGGTAACT

Flanking Amino Acid:

GDLLSIELQQAKSNSLLLQR

Intron Amino Acid Position:

996

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

87.8

0.85

0.6

83.8

24.5

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

46.8

-0.1

2.7

76.54

45.9

Associated Gene:

Gene:

RC3H2

Ensembl Gene ID:

ENSAPLG00000013920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036581

9826429 - 9844074

17646

ENSAPLT00000022596

9826296 - 9844074

17779

ENSAPLT00000014540

9826296 - 9844074

17779