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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9832687_9833875_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9832687 - 9833875

Intron Length:

1189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGAAGC

5'SS Class:

major

3'SS Sequence:

CCCTTTTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTTCTTATTT

Flanking Amino Acid:

PLFSVDFSTEFSESVSDLSG

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

65.9

40.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

80.3

0.68

0.7

76.3

25.8

Minor 5ss

-2.6

34.1

41.6

Minor BPS

75.8

0.89

1.5

91.23

32.5

Associated Gene:

Gene:

RC3H2

Ensembl Gene ID:

ENSAPLG00000013920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036581

9826429 - 9844074

17646

ENSAPLT00000014540

9826296 - 9844074

17779