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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9837317_9837937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9837317 - 9837937

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

GTTTGCATATGT

Flanking Amino Acid:

TFAHSQEELEKYRLRNKKIS

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.8

23.7

Major BPS

80.4

0.76

80.3

31.8

Major PPT

81.9

0.72

0.8

77.2

37.1

Minor 5ss

35.6

-1.6

2.8

42.6

38.4

Minor BPS

44.1

-0.3

2.4

69.5

46.9

Associated Gene:

Gene:

RC3H2

Ensembl Gene ID:

ENSAPLG00000013920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022596

9826296 - 9844074

17779

ENSAPLT00000014540

9826296 - 9844074

17779

ENSAPLT00000036581

9826429 - 9844074

17646